LRRC55

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRRC55 mutation is significantly associated with the total protein of many other genes, with 25 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LRRC55-associated genes across cancer lineages are p38-MAPK_pT180_Y182, Annexin-1, and VHL. Each is linked with LRRC55 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRRC55-to-partner and partner-to-LRRC55 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRC55→partner) and Y-score (partner→LRRC55) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp38-MAPK_pT180_Y182 →-0.420-2.000.020.03032
UCECAnnexin-1 →+0.482+2.341.023.01932
UCECVHL →-0.838-2.000.002.03032
SKCMN-Ras →+0.151+1.584.004.03532
UCECKu80 →+0.253+2.331.007.01931
UCECMAPK_pT202_Y204 →-0.406-2.000.031.03031
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

Exploration