LRRC49

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRRC49 RNA expression is significantly associated with the RNA expression of many other genes, with 19,389 significant associations in total. KIRP shows the largest number of these associations.

The most reproducible LRRC49-associated genes across cancer lineages are THAP10, DHX57, and NPHP1. Each is linked with LRRC49 in more than 32 cancer types. Because this analysis shows association rather than direction, both LRRC49-to-partner and partner-to-LRRC49 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LRRC49 versus THAP10 in THYM, with a Pearson correlation of 0.83.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRRC49→partner) and Y-score (partner→LRRC49) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
THYMTHAP10 →+1.225+1.178<.001<.001333
ACCDHX57 →+1.066+1.000<.001<.001332
KIRPNPHP1 →+0.909+0.833<.001<.001332
BRCAFSIP1 →+1.325+0.381<.001<.001332
TGCTOPHN1 →+1.510+0.820<.001<.001332
UVMWDR35 →+1.201+0.367<.001<.001332
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,389 associations by consensus.

LRRC49 vs THAP10 — THYM

Per-sample scatter of LRRC49 vs THAP10 in THYM (Pearson r = 0.83).

Explore this scatter interactively →

Exploration