LRRC3-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LRRC3-DT RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of LRRC3-DT’s most consistent transcriptional readouts.

The strongest signal is observed in kidney renal papillary cell carcinoma (KIRP), where LRRC3-DT RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LRRC3-DT is over-expressed in tumor, although a few such as BRCA and STAD show the opposite, repressed pattern.

KIRP, BRCA, and STAD are the cancer types where LRRC3-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LRRC3-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KIRPAllAll+0.199<.0019view →
BRCAFemaleAll−0.105<.0016view →
STADAllAll−0.765<.0015view →
CHOLAllAll−0.571<.0013view →
READAllAll−0.356.0112view →
PRADAllAll+0.233<.0012view →
THCAMaleIII,IV−0.118.0082view →
HNSCMaleIII,IV+0.094.0352view →
BLCAMaleIV−0.325.0261view →
LIHCMaleII,III,IV−0.208.0261view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

LRRC3-DT–KIRP

Tumor-vs-normal expression box plot for LRRC3-DT RNA in KIRP.

Open the KIRP breakdown →

Exploration