LRIG3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRIG3 mutation is significantly associated with the total protein of many other genes, with 38 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LRIG3-associated genes across cancer lineages are 4E-BP1, Snail, and 14-3-3_beta. Each is linked with LRIG3 in more than 2 cancer types. Because this analysis shows association rather than direction, both LRIG3-to-partner and partner-to-LRIG3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 4E-BP1 grouped by LRIG3-low versus LRIG3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRIG3→partner) and Y-score (partner→LRIG3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC4E-BP1 →+0.309+3.807<.001<.00133
SKCMSnail →-0.264-2.987.004.03532
UCEC14-3-3_beta →-0.069-1.651.022.01932
UCECCaspase-7-cleavedD198 →+0.526+2.090.003<.00132
SKCMPaxillin →+0.568+3.000.010.03531
UCECeIF4E →+0.164+2.713.010.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 38 associations by consensus.

4E-BP1 by LRIG3 expression — UCEC

Box plot of 4E-BP1 in LRIG3-low vs LRIG3-high samples in UCEC.

Explore this box plot interactively →

Exploration