LRIG2

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, LRIG2 mutation is significantly associated with the RNA expression of many other genes, with 29 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible LRIG2-associated genes across cancer lineages are WNT8A, TAS1R2, and PRLHR. Each is linked with LRIG2 in more than 1 cancer types. Because this analysis shows association rather than direction, both LRIG2-to-partner and partner-to-LRIG2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRIG2→partner) and Y-score (partner→LRIG2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEWNT8A →+0.039+4.217<.001.00132
BREASTTAS1R2 →+0.014+4.199<.001.00732
SKINPRLHR →+0.015+5.022<.001.00231
SKINGPR31 →+0.004+4.415<.001.00731
SKINSCGB2A1 →+0.093+4.415<.001.00731
SKINIL9 →+0.037+5.022<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 29 associations by consensus.

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