LRFN5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LRFN5 mutation is significantly associated with the total protein of many other genes, with 66 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LRFN5-associated genes across cancer lineages are Caspase-7-cleavedD198, Chk1, and Raptor. Each is linked with LRFN5 in more than 2 cancer types. Because this analysis shows association rather than direction, both LRFN5-to-partner and partner-to-LRFN5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Caspase-7-cleavedD198 grouped by LRFN5-low versus LRFN5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LRFN5→partner) and Y-score (partner→LRFN5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCaspase-7-cleavedD198 →+0.630+1.958<.001<.00133
LUADChk1 →+0.287+3.584<.001.00233
LUSCRaptor →-0.176-1.751.008.01133
UCECASNS →+0.425+1.807<.001.00333
UCECC-Raf →+0.161+1.736<.001<.00133
STADTIGAR →+0.411+2.321.026.03432
Each partner links to its Q-omics profile. Showing the 6 strongest of 66 associations by consensus.

Caspase-7-cleavedD198 by LRFN5 expression — UCEC

Box plot of Caspase-7-cleavedD198 in LRFN5-low vs LRFN5-high samples in UCEC.

Explore this box plot interactively →

Exploration