LPAR4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LPAR4 mutation is significantly associated with the total protein of many other genes, with 47 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LPAR4-associated genes across cancer lineages are 53BP1, Caspase-7-cleavedD198, and Cyclin-B1. Each is linked with LPAR4 in more than 2 cancer types. Because this analysis shows association rather than direction, both LPAR4-to-partner and partner-to-LPAR4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, 53BP1 grouped by LPAR4-low versus LPAR4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LPAR4→partner) and Y-score (partner→LPAR4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCEC53BP1 →+0.254+2.321.029.00533
LUSCCaspase-7-cleavedD198 →+0.474+2.179.043.03532
SKCMCyclin-B1 →+0.383+2.182.016.03332
SKCME-Cadherin →-0.716-1.584.036.03532
UCECJNK2 →+0.299+2.916<.001<.00132
UCECp62 Lck ligand →+0.298+1.775.007.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 47 associations by consensus.

53BP1 by LPAR4 expression — UCEC

Box plot of 53BP1 in LPAR4-low vs LPAR4-high samples in UCEC.

Explore this box plot interactively →

Exploration