LOH12CR2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LOH12CR2 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,688 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LOH12CR2-associated proteins across cancer lineages are NBEAL2, STAT1_S532, and PTK2B_S375. Each is linked with LOH12CR2 in more than 5 cancer types. Because this analysis shows association rather than direction, both LOH12CR2-to-partner and partner-to-LOH12CR2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LOH12CR2→partner) and Y-score (partner→LOH12CR2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACNBEAL2 →-0.302-0.355<.001<.00136
CCRCCSTAT1_S532 →-0.985-0.434<.001<.00135
LSCCPTK2B_S375 →-0.351-0.477<.001.00135
COADEPM2AIP1 →+0.381+0.301<.001.00135
LSCCMAP1B →+0.676+0.374<.001<.00135
GBMFERMT3 →-0.447-0.457.005.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,688 associations by consensus.

Exploration