LMTK2

Across TCGA patient cohorts, LMTK2 protein abundance is significantly associated with the RNA expression of many other genes, with 7,870 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible LMTK2-associated genes across cancer lineages are APTR, C1orf54, and GYPC. Each is linked with LMTK2 in more than 4 cancer types. Because this analysis shows association rather than direction, both LMTK2-to-partner and partner-to-LMTK2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LMTK2 versus APTR in CCRCC, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMTK2→partner) and Y-score (partner→LMTK2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	APTR →	+0.656	+0.441	<.001	<.001	3	5
UCEC	C1orf54 →	-0.796	-0.201	.001	.002	3	4
GBM	GYPC →	-0.706	-0.131	.005	.006	2	5
COAD	LMBR1 →	+0.450	+0.354	<.001	.002	3	4
PDAC	AGFG2 →	+0.603	+0.311	.001	<.001	3	4
LSCC	AP1S1 →	+0.568	+0.261	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,870 associations by consensus.

LMTK2 vs APTR — CCRCC

Explore this scatter interactively →