LMO4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LMO4 RNA expression is significantly associated with the protein abundance of many other proteins, with 19,596 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LMO4-associated proteins across cancer lineages are ZNF703_S252, CROCC_S512, and EPB41L2. Each is linked with LMO4 in more than 4 cancer types. Because this analysis shows association rather than direction, both LMO4-to-partner and partner-to-LMO4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LMO4 versus ZNF703_S252 in HNSC, with a Pearson correlation of 0.43.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LMO4→partner) and Y-score (partner→LMO4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCZNF703_S252 →+0.818+0.999<.001<.00135
PDACCROCC_S512 →+0.631+0.517.001.00135
HNSCEPB41L2 →+0.386+0.572<.001.00235
LSCCCYB5R2 →+0.537+0.547.001.00334
BRCAHDDC3 →-0.634-1.401<.001<.00134
BRCAUPF3B →+0.233+0.884<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,596 associations by consensus.

LMO4 vs ZNF703_S252 — HNSC

Per-sample scatter of LMO4 vs ZNF703_S252 in HNSC (Pearson r = 0.43).

Explore this scatter interactively →

Exploration