LMBRD1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LMBRD1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,739 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LMBRD1-associated genes across cancer lineages are FADS1, PPM1G, and USP18. Each is linked with LMBRD1 in more than 4 cancer types. Because this analysis shows association rather than direction, both LMBRD1-to-partner and partner-to-LMBRD1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LMBRD1 versus FADS1 in OV, with a Pearson correlation of -0.42.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LMBRD1→partner) and Y-score (partner→LMBRD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFADS1 →-1.184-0.662<.001<.00135
HNSCPPM1G →-0.696-0.212<.001.00534
HNSCUSP18 →-1.061-0.317.007<.00134
UCECPDCD5 →-0.719-0.392.002<.00133
UCECDNAJC2 →-0.424-0.562<.001<.00133
UCECUBE2S →-0.763-0.414.001.00433
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,739 associations by consensus.

LMBRD1 vs FADS1 — OV

Per-sample scatter of LMBRD1 vs FADS1 in OV (Pearson r = -0.42).

Explore this scatter interactively →

Exploration