Across TCGA patient cohorts, LIPK mutation is significantly associated with the immune_cell of many other genes, with 2 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible LIPK-associated genes across cancer lineages are GMP and Megakaryocytes. Each is linked with LIPK in more than 1 cancer types. Because this analysis shows association rather than direction, both LIPK-to-partner and partner-to-LIPK results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LIPK→partner) and Y-score (partner→LIPK) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	GMP →	+0.046	+2.221	<.001	.009	3	1
SKCM	Megakaryocytes →	+0.026	+2.843	.030	.049	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

Exploration

LIPK survival (RNA) · tumor vs normal (RNA) · all LIPK data types