LINC02883

Across TCGA patient cohorts, LINC02883 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,899 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02883-associated proteins across cancer lineages are SCAF8, SMC3, and AHNAK2_S4419. Each is linked with LINC02883 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02883-to-partner and partner-to-LINC02883 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02883 versus SCAF8 in GBM, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02883→partner) and Y-score (partner→LINC02883) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SCAF8 →	+0.156	+0.662	<.001	<.001	3	4
GBM	SMC3 →	+0.352	+1.052	<.001	<.001	3	4
LSCC	AHNAK2_S4419 →	-0.864	-0.443	<.001	<.001	3	4
GBM	FAM98B →	+0.253	+0.743	<.001	.001	3	4
HNSC	KAT7 →	+0.272	+0.727	<.001	.001	3	4
PDAC	ANP32A →	+0.295	+0.446	<.001	.001	2	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,899 associations by consensus.

LINC02883 vs SCAF8 — GBM

Explore this scatter interactively →