LINC02882

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02882 mutation is significantly associated with the RNA expression of many other genes, with 92 significant associations in total. CESC shows the largest number of these associations.

The most reproducible LINC02882-associated genes across cancer lineages are RNA5SP248, MIR4698, and PNLIPRP2. Each is linked with LINC02882 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02882-to-partner and partner-to-LINC02882 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP248 grouped by LINC02882-low versus LINC02882-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02882→partner) and Y-score (partner→LINC02882) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP248 →+0.441+3.334.008.00832
UCECMIR4698 →+0.763+5.031<.001<.00131
UCECPNLIPRP2 →+0.229+3.731.006.00631
UCECMIR3163 →+0.526+3.638.006.00631
UCECEML2-AS1 →+0.182+3.914<.001.00431
UCECSREK1IP1P2 →+0.426+3.795<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 92 associations by consensus.

RNA5SP248 by LINC02882 expression — UCEC

Box plot of RNA5SP248 in LINC02882-low vs LINC02882-high samples in UCEC.

Explore this box plot interactively →

Exploration