LINC02857

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02857 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,973 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02857-associated proteins across cancer lineages are MYOF, NSF, and PYGL. Each is linked with LINC02857 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02857-to-partner and partner-to-LINC02857 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02857 versus MYOF in PDAC, with a Pearson correlation of -0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02857→partner) and Y-score (partner→LINC02857) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACMYOF →-0.408-0.166<.001<.00133
GBMNSF →+0.403+0.164<.001<.00133
GBMPYGL →-0.459-0.250<.001<.00133
COADRAP1GAP →+0.671+0.056<.001<.00133
GBMRAP1GAP2 →+0.380+0.157<.001<.00133
GBMRAP1GAP2_S558 →+0.859+0.230<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,973 associations by consensus.

LINC02857 vs MYOF — PDAC

Per-sample scatter of LINC02857 vs MYOF in PDAC (Pearson r = -0.38).

Explore this scatter interactively →

Exploration