LINC02820

Across TCGA patient cohorts, LINC02820 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,894 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02820-associated proteins across cancer lineages are SMARCD1, ADNP_S921, and DNMT3A. Each is linked with LINC02820 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC02820-to-partner and partner-to-LINC02820 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02820 versus SMARCD1 in HNSC, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02820→partner) and Y-score (partner→LINC02820) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	SMARCD1 →	+0.337	+2.153	<.001	<.001	3	4
LSCC	ADNP_S921 →	+0.501	+1.967	<.001	<.001	3	4
OV	DNMT3A →	+0.604	+1.690	<.001	<.001	3	4
OV	ZCCHC3 →	+0.615	+1.712	.002	.001	3	4
OV	MTM1 →	-0.288	-1.741	.003	<.001	3	4
LSCC	RGS3 →	-0.313	-1.723	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,894 associations by consensus.

LINC02820 vs SMARCD1 — HNSC

Explore this scatter interactively →