LINC02748

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02748 RNA expression is significantly associated with the RNA expression of many other genes, with 7,976 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02748-associated genes across cancer lineages are MRPS35P3, LINC02722, and ZNF385D-AS2. Each is linked with LINC02748 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC02748-to-partner and partner-to-LINC02748 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02748 versus MRPS35P3 in ESCA, with a Pearson correlation of 0.66.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02748→partner) and Y-score (partner→LINC02748) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAMRPS35P3 →+0.508+0.055<.001<.001310
SARCLINC02722 →+0.539+0.273<.001.003310
UCECZNF385D-AS2 →+0.612+0.038<.001<.001310
ESCANR1H5P →+0.517+0.042<.001<.001310
ESCALINC00374 →+0.667+0.047<.001<.001310
STADLINC01746 →+0.504+0.048<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,976 associations by consensus.

LINC02748 vs MRPS35P3 — ESCA

Per-sample scatter of LINC02748 vs MRPS35P3 in ESCA (Pearson r = 0.66).

Explore this scatter interactively →

Exploration