LINC02747

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02747 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,873 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC02747-associated proteins across cancer lineages are ICAM1, PLEKHA6, and PLS1. Each is linked with LINC02747 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02747-to-partner and partner-to-LINC02747 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02747 versus ICAM1 in BRCA, with a Pearson correlation of -0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02747→partner) and Y-score (partner→LINC02747) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAICAM1 →-0.662-1.814<.001<.00135
BRCAPLEKHA6 →+0.610+1.775<.001<.00134
PDACPLS1 →+0.609+1.163<.001<.00134
BRCAPTPN2 →-0.323-1.614<.001<.00134
BRCABCAS1_S552 →+1.946+1.785<.001<.00134
BRCATHEMIS2 →-0.542-1.709<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,873 associations by consensus.

LINC02747 vs ICAM1 — BRCA

Per-sample scatter of LINC02747 vs ICAM1 in BRCA (Pearson r = -0.47).

Explore this scatter interactively →

Exploration