LINC02742

Across TCGA patient cohorts, LINC02742 RNA expression is significantly associated with the RNA expression of many other genes, with 7,490 significant associations in total. LIHC shows the largest number of these associations.

The most reproducible LINC02742-associated genes across cancer lineages are BDNF, ITGA3, and LINC00973. Each is linked with LINC02742 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC02742-to-partner and partner-to-LINC02742 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02742 versus BDNF in MESO, with a Pearson correlation of 0.49.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02742→partner) and Y-score (partner→LINC02742) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
MESO	BDNF →	+1.588	+1.020	<.001	<.001	3	17
GBM	ITGA3 →	+1.404	+0.576	<.001	<.001	3	13
SKCM	LINC00973 →	+0.917	+0.138	<.001	<.001	3	13
SKCM	SLC20A1 →	+1.199	+0.142	<.001	<.001	3	13
LIHC	PLOD2 →	+0.853	+0.008	<.001	.004	2	13
LIHC	SLC16A3 →	+1.250	+0.008	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,490 associations by consensus.

LINC02742 vs BDNF — MESO

Explore this scatter interactively →