LINC02740

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC02740 RNA differs between tumor and matched normal tissue in 5 of 18 cancer types tested, making tumor–normal expression one of LINC02740’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where LINC02740 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC02740 is over-expressed in tumor, although a few such as THCA and BRCA show the opposite, repressed pattern.

THCA, BRCA, and KICH are the cancer types where LINC02740 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02740 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAAllAll−0.068<.0016view →
BRCAFemaleAll−0.025.0083view →
KICHFemaleAll+0.143.0411view →
KIRPAllAll+0.099.0401view →
KIRCMaleAll−0.018.0011view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 5 strongest of 5 lineages.

LINC02740–THCA

Tumor-vs-normal expression box plot for LINC02740 RNA in THCA.

Open the THCA breakdown →

Exploration