LINC02709

Across TCGA patient cohorts, LINC02709 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,287 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02709-associated proteins across cancer lineages are UNG_S23, BLNK, and MCM2. Each is linked with LINC02709 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02709-to-partner and partner-to-LINC02709 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02709 versus UNG_S23 in LSCC, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02709→partner) and Y-score (partner→LINC02709) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	UNG_S23 →	+0.891	+0.415	<.001	<.001	3	5
LSCC	BLNK →	-0.387	-0.308	<.001	<.001	3	5
LSCC	MCM2 →	+0.542	+0.419	<.001	<.001	3	5
LSCC	MCM4 →	+0.592	+0.430	<.001	<.001	3	5
LSCC	ZMYM3_S464 →	+0.377	+0.396	<.001	<.001	3	5
BRCA	SMAP2_S235 →	-0.352	-0.244	<.001	.002	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,287 associations by consensus.

LINC02709 vs UNG_S23 — LSCC

Explore this scatter interactively →