LINC02704

Across TCGA patient cohorts, LINC02704 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,046 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC02704-associated GO terms across cancer lineages are tRNA 5'-leader removal, Mitochondrial gene expression, and Negative regulation of mitotic cell cycle phase transition. Each is linked with LINC02704 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC02704-to-partner and partner-to-LINC02704 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA 5'-leader removal grouped by LINC02704-low versus LINC02704-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02704→partner) and Y-score (partner→LINC02704) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	tRNA 5'-leader removal →	+0.038	+0.130	<.001	<.001	3	12
STAD	Mitochondrial gene expression →	+0.052	+0.119	<.001	<.001	3	10
ESCA	Negative regulation of mitotic cell cycle phase transition →	+0.055	+0.138	<.001	.005	2	11
STAD	Protein localization to chromosome, centromeric region →	+0.056	+0.181	<.001	<.001	3	9
ESCA	Response to hydroxyurea →	+0.067	+0.143	<.001	.001	3	9
STAD	Meiotic sister chromatid cohesion →	+0.051	+0.187	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,046 associations by consensus.

tRNA 5'-leader removal by LINC02704 expression — STAD

Explore this box plot interactively →