LINC02650

Across TCGA patient cohorts, LINC02650 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,807 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02650-associated GO terms across cancer lineages are Pyridine-containing compound metabolic process, snRNA 3'-end processing, and Cellular ketone metabolic process. Each is linked with LINC02650 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02650-to-partner and partner-to-LINC02650 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Pyridine-containing compound metabolic process grouped by LINC02650-low versus LINC02650-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02650→partner) and Y-score (partner→LINC02650) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Pyridine-containing compound metabolic process →	+0.103	+0.134	<.001	<.001	3	5
ESCA	snRNA 3'-end processing →	+0.122	+0.143	<.001	.001	3	5
STAD	Cellular ketone metabolic process →	+0.091	+0.107	<.001	<.001	3	5
STAD	Ribosomal large subunit biogenesis →	+0.177	+0.120	<.001	<.001	3	5
STAD	Cellular metabolic compound salvage →	+0.123	+0.103	<.001	<.001	3	5
STAD	Amino acid metabolic process →	+0.100	+0.132	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,807 associations by consensus.

Pyridine-containing compound metabolic process by LINC02650 expression — STAD

Explore this box plot interactively →