LINC02640

Across TCGA patient cohorts, LINC02640 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,016 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02640-associated GO terms across cancer lineages are Positive regulation of cytoplasmic mRNA processing body assembly, Lipoprotein metabolic process, and Negative regulation of mRNA processing. Each is linked with LINC02640 in more than 19 cancer types. Because this analysis shows association rather than direction, both LINC02640-to-partner and partner-to-LINC02640 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of cytoplasmic mRNA processing body assembly grouped by LINC02640-low versus LINC02640-high in UVM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02640→partner) and Y-score (partner→LINC02640) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	Positive regulation of cytoplasmic mRNA processing body assembly →	+0.047	+0.078	.002	.001	2	20
STAD	Lipoprotein metabolic process →	+0.043	+0.230	<.001	<.001	3	19
STAD	Negative regulation of mRNA processing →	+0.049	+0.178	<.001	<.001	3	19
STAD	Peptidyl-lysine methylation →	+0.038	+0.151	<.001	<.001	3	18
STAD	Methylation →	+0.040	+0.157	<.001	<.001	3	18
STAD	Protein localization to lysosome →	+0.043	+0.184	<.001	<.001	3	18

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,016 associations by consensus.

Positive regulation of cytoplasmic mRNA processing body assembly by LINC02640 expression — UVM

Explore this box plot interactively →