LINC02637

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02637 mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02637-associated genes across cancer lineages are ARPP19P2, RNU6-5P, and RNU6-73P. Each is linked with LINC02637 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC02637-to-partner and partner-to-LINC02637 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ARPP19P2 grouped by LINC02637-low versus LINC02637-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02637→partner) and Y-score (partner→LINC02637) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECARPP19P2 →+0.293+3.354.007.00731
UCECRNU6-5P →+0.895+3.771<.001.00631
UCECRNU6-73P →+0.303+4.226<.001.00831
UCECRNU6ATAC26P →+0.487+3.599<.001.00731
UCECRNA5SP146 →+0.369+3.525.001.00831
UCECIGHD1-1 →+0.811+4.335<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

ARPP19P2 by LINC02637 expression — UCEC

Box plot of ARPP19P2 in LINC02637-low vs LINC02637-high samples in UCEC.

Explore this box plot interactively →

Exploration