LINC02584

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, LINC02584 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of LINC02584’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where LINC02584 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types LINC02584 is over-expressed in tumor, although a few such as BRCA and PRAD show the opposite, repressed pattern.

HNSC, COAD, and BLCA are the cancer types where LINC02584 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02584 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCMaleAll+0.528<.00112view →
COADAllAll+0.107<.0019view →
BLCAAllAll+0.121.0037view →
BRCAFemaleAll−0.394<.0016view →
STADAllAll+0.334.0026view →
THCAMaleAll+0.221.0016view →
KIRCMaleIII,IV+0.040.0035view →
UCECAllAll+0.177.0014view →
LUSCAllII,III,IV+0.135.0034view →
LUADAllAll+0.128.0074view →
PRADAllAll−0.220.0182view →
LIHCAllAll+0.060.0311view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

LINC02584–HNSC

Tumor-vs-normal expression box plot for LINC02584 RNA in HNSC.

Open the HNSC breakdown →

Exploration