LINC02546

Across TCGA patient cohorts, LINC02546 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,350 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02546-associated GO terms across cancer lineages are Ribosomal large subunit assembly, Membrane biogenesis, and Protein localization to mitochondrion. Each is linked with LINC02546 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02546-to-partner and partner-to-LINC02546 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribosomal large subunit assembly grouped by LINC02546-low versus LINC02546-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02546→partner) and Y-score (partner→LINC02546) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Ribosomal large subunit assembly →	+0.113	+0.107	<.001	<.001	3	9
STAD	Membrane biogenesis →	+0.092	+0.112	<.001	<.001	3	9
STAD	Protein localization to mitochondrion →	+0.102	+0.117	<.001	<.001	3	8
STAD	Plasma membrane to endosome transport →	+0.085	+0.110	<.001	<.001	3	8
STAD	Biological process involved in interaction with host →	+0.098	+0.125	<.001	<.001	3	8
STAD	Protein localization to chromosome, telomeric region →	+0.102	+0.113	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,350 associations by consensus.

Ribosomal large subunit assembly by LINC02546 expression — STAD

Explore this box plot interactively →