LINC02541

Across TCGA patient cohorts, LINC02541 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,654 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02541-associated proteins across cancer lineages are MNDA, NCF2, and NCF4. Each is linked with LINC02541 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC02541-to-partner and partner-to-LINC02541 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02541 versus MNDA in GBM, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02541→partner) and Y-score (partner→LINC02541) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	MNDA →	+0.877	+0.433	<.001	<.001	3	5
GBM	NCF2 →	+0.538	+0.377	.001	<.001	3	5
GBM	NCF4 →	+0.632	+0.488	<.001	<.001	3	5
GBM	PTPN6 →	+0.476	+0.421	<.001	<.001	3	5
BRCA	SASH3 →	+0.426	+0.521	<.001	.001	3	5
UCEC	TBXAS1 →	+0.548	+0.498	<.001	.009	2	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,654 associations by consensus.

LINC02541 vs MNDA — GBM

Explore this scatter interactively →