LINC02535

Across TCGA patient cohorts, LINC02535 RNA expression is significantly associated with the RNA expression of many other genes, with 12,646 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC02535-associated genes across cancer lineages are NT5E, SNX14, and LIMA1. Each is linked with LINC02535 in more than 24 cancer types. Because this analysis shows association rather than direction, both LINC02535-to-partner and partner-to-LINC02535 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02535 versus NT5E in CESC, with a Pearson correlation of 0.62.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02535→partner) and Y-score (partner→LINC02535) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	NT5E →	+2.289	+0.425	<.001	<.001	3	25
SKCM	SNX14 →	+0.656	+0.205	<.001	<.001	3	22
HNSC	LIMA1 →	+1.024	+0.515	<.001	<.001	3	21
TGCT	PTPRK →	+1.407	+0.234	<.001	<.001	3	20
SKCM	ATG5 →	+0.716	+0.186	<.001	<.001	3	20
ESCA	ARHGAP18 →	+1.214	+1.298	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,646 associations by consensus.

LINC02535 vs NT5E — CESC

Explore this scatter interactively →