LINC02504

Across TCGA patient cohorts, LINC02504 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,525 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02504-associated GO terms across cancer lineages are Regulation of circadian rhythm, Positive regulation of DNA metabolic process, and Regulation of mitochondrial membrane potential. Each is linked with LINC02504 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC02504-to-partner and partner-to-LINC02504 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of circadian rhythm grouped by LINC02504-low versus LINC02504-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02504→partner) and Y-score (partner→LINC02504) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of circadian rhythm →	+0.052	+0.095	<.001	<.001	3	10
ESCA	Positive regulation of DNA metabolic process →	+0.064	+0.115	<.001	<.001	3	10
STAD	Regulation of mitochondrial membrane potential →	+0.047	+0.084	<.001	<.001	3	10
ESCA	Positive regulation of telomere maintenance →	+0.070	+0.151	<.001	<.001	3	10
STAD	Methylation →	+0.056	+0.100	<.001	<.001	3	10
ESCA	Positive regulation of proteasomal protein catabolic process →	+0.064	+0.160	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,525 associations by consensus.

Regulation of circadian rhythm by LINC02504 expression — STAD

Explore this box plot interactively →