LINC02496

Across TCGA patient cohorts, LINC02496 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,426 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02496-associated GO terms across cancer lineages are Transport along microtubule, Regulation of microtubule-based process, and Regulation of RNA splicing. Each is linked with LINC02496 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC02496-to-partner and partner-to-LINC02496 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Transport along microtubule grouped by LINC02496-low versus LINC02496-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02496→partner) and Y-score (partner→LINC02496) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Transport along microtubule →	+0.131	+0.085	<.001	<.001	3	6
STAD	Regulation of microtubule-based process →	+0.119	+0.040	<.001	.001	3	6
STAD	Regulation of RNA splicing →	+0.166	+0.036	<.001	.002	3	6
STAD	Monosaccharide metabolic process →	+0.135	+0.038	<.001	.001	3	5
STAD	Positive regulation of DNA-templated transcription initiation →	+0.154	+0.036	<.001	.003	3	5
STAD	Protein acetylation →	+0.145	+0.065	<.001	.005	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,426 associations by consensus.

Transport along microtubule by LINC02496 expression — STAD

Explore this box plot interactively →