LINC02493

Across TCGA patient cohorts, LINC02493 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,016 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02493-associated GO terms across cancer lineages are Negative regulation of establishment of protein localization, Synaptic vesicle recycling, and Regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Each is linked with LINC02493 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02493-to-partner and partner-to-LINC02493 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of establishment of protein localization grouped by LINC02493-low versus LINC02493-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02493→partner) and Y-score (partner→LINC02493) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of establishment of protein localization →	+0.086	+0.047	<.001	<.001	3	8
STAD	Synaptic vesicle recycling →	+0.069	+0.052	<.001	<.001	3	8
STAD	Regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay →	+0.085	+0.046	<.001	<.001	3	7
STAD	Regulation of binding →	+0.109	+0.052	<.001	<.001	3	7
STAD	Cellular response to oxygen levels →	+0.096	+0.049	<.001	<.001	3	7
STAD	Cellular response to gamma radiation →	+0.108	+0.053	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,016 associations by consensus.

Negative regulation of establishment of protein localization by LINC02493 expression — STAD

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