LINC02490

Across TCGA patient cohorts, LINC02490 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,625 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC02490-associated GO terms across cancer lineages are Nucleoside bisphosphate metabolic process, Respiratory electron transport chain, and Electron transport chain. Each is linked with LINC02490 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC02490-to-partner and partner-to-LINC02490 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleoside bisphosphate metabolic process grouped by LINC02490-low versus LINC02490-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02490→partner) and Y-score (partner→LINC02490) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nucleoside bisphosphate metabolic process →	+0.052	+0.218	<.001	<.001	3	11
STAD	Respiratory electron transport chain →	+0.059	+0.175	<.001	<.001	3	10
STAD	Electron transport chain →	+0.056	+0.183	<.001	<.001	3	10
STAD	Ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway →	+0.069	+0.240	<.001	<.001	3	9
STAD	Ubiquinone metabolic process →	+0.065	+0.216	<.001	<.001	3	9
TGCT	Adenine transport →	+0.070	+0.090	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,625 associations by consensus.

Nucleoside bisphosphate metabolic process by LINC02490 expression — STAD

Explore this box plot interactively →