LINC02488

Across TCGA patient cohorts, LINC02488 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,944 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02488-associated GO terms across cancer lineages are rRNA metabolic process, Regulation of protein ubiquitination, and Regulation of post-translational protein modification. Each is linked with LINC02488 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02488-to-partner and partner-to-LINC02488 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, rRNA metabolic process grouped by LINC02488-low versus LINC02488-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02488→partner) and Y-score (partner→LINC02488) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	rRNA metabolic process →	+0.116	+0.030	<.001	<.001	3	9
STAD	Regulation of protein ubiquitination →	+0.096	+0.030	<.001	<.001	3	8
STAD	Regulation of post-translational protein modification →	+0.095	+0.056	<.001	<.001	3	8
STAD	Positive regulation of DNA repair →	+0.092	+0.032	<.001	<.001	3	8
STAD	Spindle organization →	+0.102	+0.030	<.001	<.001	3	8
STAD	tRNA processing →	+0.094	+0.055	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,944 associations by consensus.

rRNA metabolic process by LINC02488 expression — STAD

Explore this box plot interactively →