LINC02479

Across TCGA patient cohorts, LINC02479 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,064 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02479-associated GO terms across cancer lineages are Regulation of DNA binding, Cellular modified amino acid metabolic process, and rRNA modification. Each is linked with LINC02479 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02479-to-partner and partner-to-LINC02479 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA binding grouped by LINC02479-low versus LINC02479-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02479→partner) and Y-score (partner→LINC02479) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of DNA binding →	+0.088	+0.094	<.001	<.001	3	7
STAD	Cellular modified amino acid metabolic process →	+0.065	+0.092	<.001	<.001	3	6
STAD	rRNA modification →	+0.102	+0.103	<.001	<.001	3	6
STAD	Cytochrome complex assembly →	+0.101	+0.088	<.001	<.001	3	6
STAD	Tetrapyrrole biosynthetic process →	+0.090	+0.089	<.001	<.001	3	6
ESCA	Regulation of microtubule-based process →	+0.084	+0.124	<.001	.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,064 associations by consensus.

Regulation of DNA binding by LINC02479 expression — STAD

Explore this box plot interactively →