LINC02473

Across TCGA patient cohorts, LINC02473 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,040 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02473-associated proteins across cancer lineages are TRIM2, ATE1, and SLC4A1AP. Each is linked with LINC02473 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC02473-to-partner and partner-to-LINC02473 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02473 versus TRIM2 in HNSC, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02473→partner) and Y-score (partner→LINC02473) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	TRIM2 →	+0.775	+0.398	<.001	<.001	3	5
UCEC	ATE1 →	-0.222	-0.658	.001	.008	3	4
BRCA	SLC4A1AP →	+0.349	+0.997	<.001	<.001	3	4
UCEC	AKAP12_S381 →	-0.914	-0.640	<.001	.007	3	4
UCEC	SEC23A →	-0.201	-0.583	.004	.008	3	3
UCEC	SLC16A1_S467 →	-0.883	-0.444	<.001	.007	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,040 associations by consensus.

LINC02473 vs TRIM2 — HNSC

Explore this scatter interactively →