LINC02464

Across TCGA patient cohorts, LINC02464 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,009 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02464-associated proteins across cancer lineages are SPCS3, DTX3, and GTPBP4. Each is linked with LINC02464 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02464-to-partner and partner-to-LINC02464 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02464 versus SPCS3 in LSCC, with a Pearson correlation of -0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02464→partner) and Y-score (partner→LINC02464) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SPCS3 →	-0.462	-0.224	<.001	.003	3	3
HNSC	DTX3 →	+0.356	+0.455	<.001	.008	3	3
BRCA	GTPBP4 →	-0.386	-0.039	.009	.007	3	3
LSCC	MAPRE3 →	+0.383	+0.229	<.001	<.001	3	3
LSCC	FNDC3A →	-0.361	-0.251	<.001	<.001	3	3
GBM	PKN2 →	-0.164	-0.258	.008	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,009 associations by consensus.

LINC02464 vs SPCS3 — LSCC

Explore this scatter interactively →