LINC02442

Across TCGA patient cohorts, LINC02442 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,772 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02442-associated GO terms across cancer lineages are Regulation of generation of precursor metabolites and energy, Sphingolipid biosynthetic process, and Cytoskeleton-dependent intracellular transport. Each is linked with LINC02442 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC02442-to-partner and partner-to-LINC02442 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of generation of precursor metabolites and energy grouped by LINC02442-low versus LINC02442-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02442→partner) and Y-score (partner→LINC02442) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of generation of precursor metabolites and energy →	+0.068	+0.180	<.001	<.001	3	11
STAD	Sphingolipid biosynthetic process →	+0.053	+0.168	<.001	<.001	3	11
STAD	Cytoskeleton-dependent intracellular transport →	+0.061	+0.178	<.001	<.001	3	11
STAD	Phospholipid biosynthetic process →	+0.069	+0.162	<.001	<.001	3	10
STAD	Negative regulation of protein localization →	+0.071	+0.163	<.001	<.001	3	10
STAD	Positive regulation of TORC1 signaling →	+0.073	+0.146	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,772 associations by consensus.

Regulation of generation of precursor metabolites and energy by LINC02442 expression — STAD

Explore this box plot interactively →