LINC02439

Across TCGA patient cohorts, LINC02439 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,854 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02439-associated GO terms across cancer lineages are Regulation of signal transduction by p53 class mediator, snRNA 3'-end processing, and Protein folding. Each is linked with LINC02439 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC02439-to-partner and partner-to-LINC02439 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of signal transduction by p53 class mediator grouped by LINC02439-low versus LINC02439-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02439→partner) and Y-score (partner→LINC02439) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of signal transduction by p53 class mediator →	+0.114	+0.083	<.001	<.001	3	6
STAD	snRNA 3'-end processing →	+0.089	+0.087	<.001	<.001	3	6
STAD	Protein folding →	+0.113	+0.078	<.001	<.001	3	6
STAD	Protein import into mitochondrial matrix →	+0.104	+0.085	<.001	<.001	3	5
STAD	Protein stabilization →	+0.119	+0.087	<.001	<.001	3	5
STAD	Establishment of protein localization to membrane →	+0.118	+0.082	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,854 associations by consensus.

Regulation of signal transduction by p53 class mediator by LINC02439 expression — STAD

Explore this box plot interactively →