LINC02438

Across TCGA patient cohorts, LINC02438 RNA expression is significantly associated with the mutation status of many other genes, with 12,460 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02438-associated genes across cancer lineages are TP53, TTN, and PLCL1. Each is linked with LINC02438 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC02438-to-partner and partner-to-LINC02438 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TP53 grouped by LINC02438-low versus LINC02438-high in CESC.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02438→partner) and Y-score (partner→LINC02438) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CESC	TP53 →	+1.847	+0.439	.005	.008	3	7
LIHC	TTN →	+0.745	+0.186	.003	.008	3	7
UCEC	PLCL1 →	+2.104	+0.579	<.001	<.001	3	5
LUSC	TRIOBP →	+2.366	+0.794	.004	<.001	3	4
CESC	KCNA1 →	+2.819	+0.754	.001	<.001	3	4
CESC	SMARCA4 →	+2.404	+0.564	.004	.004	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,460 associations by consensus.

TP53 by LINC02438 expression — CESC

Explore this box plot interactively →