LINC02434

Across TCGA patient cohorts, LINC02434 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,310 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible LINC02434-associated GO terms across cancer lineages are GMP biosynthetic process, DNA replication initiation, and Chondroitin sulfate metabolic process. Each is linked with LINC02434 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02434-to-partner and partner-to-LINC02434 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GMP biosynthetic process grouped by LINC02434-low versus LINC02434-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02434→partner) and Y-score (partner→LINC02434) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	GMP biosynthetic process →	+0.080	+0.277	<.001	<.001	3	9
STAD	DNA replication initiation →	+0.086	+0.376	<.001	<.001	3	9
ESCA	Chondroitin sulfate metabolic process →	+0.050	+0.520	<.001	<.001	3	8
BLCA	AMP metabolic process →	+0.048	+0.528	<.001	<.001	3	8
STAD	Regulation of cyclin-dependent protein kinase activity →	+0.073	+0.346	<.001	<.001	3	8
STAD	Negative regulation of DNA repair →	+0.069	+0.278	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,310 associations by consensus.

GMP biosynthetic process by LINC02434 expression — STAD

Explore this box plot interactively →