LINC02424

Across TCGA patient cohorts, LINC02424 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,000 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC02424-associated GO terms across cancer lineages are RNA polymerase I preinitiation complex assembly, Aspartate family amino acid metabolic process, and Ubiquinone metabolic process. Each is linked with LINC02424 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC02424-to-partner and partner-to-LINC02424 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA polymerase I preinitiation complex assembly grouped by LINC02424-low versus LINC02424-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02424→partner) and Y-score (partner→LINC02424) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	RNA polymerase I preinitiation complex assembly →	+0.087	+0.099	<.001	.002	3	7
STAD	Aspartate family amino acid metabolic process →	+0.069	+0.122	<.001	<.001	3	7
STAD	Ubiquinone metabolic process →	+0.099	+0.135	<.001	<.001	3	7
UCEC	Mitochondrial membrane organization →	+0.062	+0.030	<.001	<.001	3	7
STAD	Telomerase RNA localization →	+0.109	+0.141	<.001	<.001	3	7
STAD	Response to ionizing radiation →	+0.104	+0.123	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,000 associations by consensus.

RNA polymerase I preinitiation complex assembly by LINC02424 expression — STAD

Explore this box plot interactively →