LINC02422

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02422 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,430 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02422-associated proteins across cancer lineages are WAS, WIPF1, and ARHGAP45. Each is linked with LINC02422 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02422-to-partner and partner-to-LINC02422 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02422 versus WAS in HNSC, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02422→partner) and Y-score (partner→LINC02422) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCWAS →+0.434+0.552<.001<.00139
LSCCWIPF1 →+0.349+0.691<.001<.00139
GBMARHGAP45 →+0.679+0.376<.001<.00139
GBMPTPN6 →+0.737+0.373<.001<.00139
LSCCRCSD1 →+0.596+0.763<.001<.00139
BRCASAMHD1 →+0.465+0.600<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,430 associations by consensus.

LINC02422 vs WAS — HNSC

Per-sample scatter of LINC02422 vs WAS in HNSC (Pearson r = 0.49).

Explore this scatter interactively →

Exploration