LINC02419

Across TCGA patient cohorts, LINC02419 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,239 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02419-associated GO terms across cancer lineages are Establishment of protein localization to membrane, ATP synthesis coupled electron transport, and Positive regulation of DNA repair. Each is linked with LINC02419 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02419-to-partner and partner-to-LINC02419 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of protein localization to membrane grouped by LINC02419-low versus LINC02419-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02419→partner) and Y-score (partner→LINC02419) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Establishment of protein localization to membrane →	+0.058	+0.067	<.001	.004	2	9
HNSC	ATP synthesis coupled electron transport →	+0.022	+0.062	<.001	<.001	3	8
STAD	Positive regulation of DNA repair →	+0.063	+0.079	<.001	<.001	3	8
STAD	Protein insertion into ER membrane →	+0.062	+0.099	<.001	<.001	3	8
STAD	Mitochondrial transport →	+0.066	+0.098	<.001	<.001	2	9
STAD	DNA conformation change →	+0.065	+0.088	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,239 associations by consensus.

Establishment of protein localization to membrane by LINC02419 expression — STAD

Explore this box plot interactively →