LINC02413

Across TCGA pan-cancer cohorts, LINC02413 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of LINC02413’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where LINC02413 RNA is repressed in tumor relative to normal tissue. In most cancer types LINC02413 is over-expressed in tumor, although a few such as KICH and KIRP show the opposite, repressed pattern.

KICH, KIRP, and LUAD are the cancer types where LINC02413 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in LINC02413 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
KICH	Male	All	−0.436	<.001	9	view →
KIRP	Male	All	−0.155	<.001	7	view →
LUAD	Male	All	−0.225	<.001	6	view →
LUSC	All	All	−0.244	<.001	5	view →
BLCA	All	All	−0.143	.019	5	view →
COAD	All	All	+0.296	.002	3	view →
PAAD	Male	All	−0.210	.047	2	view →
THCA	All	All	−0.172	.023	2	view →
KIRC	Male	II,III,IV	−0.115	.040	1	view →
CHOL	Female	All	+0.076	.042	1	view →
LIHC	Female	All	+0.063	.040	1	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

LINC02413–KICH

Open the KICH breakdown →