LINC02408

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02408 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,992 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC02408-associated proteins across cancer lineages are AEBP1, FN1, and THBS2. Each is linked with LINC02408 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC02408-to-partner and partner-to-LINC02408 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02408→partner) and Y-score (partner→LINC02408) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAAEBP1 →+0.824+0.297<.001<.00139
LSCCFN1 →+1.009+0.637<.001<.00139
OVTHBS2 →+1.712+0.887<.001<.00139
LSCCMXRA5 →+0.986+0.638<.001<.00139
BRCAZYX →+0.382+0.374<.001<.00138
BRCARAI14 →+0.417+0.248<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,992 associations by consensus.

Exploration