LINC02405

Across TCGA patient cohorts, LINC02405 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,693 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02405-associated GO terms across cancer lineages are RNA 3'-end processing, Positive regulation of protein ubiquitination, and Nuclear envelope organization. Each is linked with LINC02405 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC02405-to-partner and partner-to-LINC02405 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA 3'-end processing grouped by LINC02405-low versus LINC02405-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02405→partner) and Y-score (partner→LINC02405) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	RNA 3'-end processing →	+0.051	+0.375	.003	<.001	3	14
ESCA	Positive regulation of protein ubiquitination →	+0.051	+0.382	.003	<.001	3	14
STAD	Nuclear envelope organization →	+0.057	+0.289	<.001	<.001	3	13
STAD	Metaphase chromosome alignment →	+0.069	+0.371	<.001	<.001	3	13
STAD	Double-strand break repair via nonhomologous end joining →	+0.045	+0.314	<.001	<.001	3	13
STAD	Nuclear membrane organization →	+0.055	+0.296	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,693 associations by consensus.

RNA 3'-end processing by LINC02405 expression — ESCA

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