LINC02398

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC02398 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,544 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC02398-associated proteins across cancer lineages are MTURN, PDE3A, and RHBDF2_S385. Each is linked with LINC02398 in more than 2 cancer types. Because this analysis shows association rather than direction, both LINC02398-to-partner and partner-to-LINC02398 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC02398 versus MTURN in GBM, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02398→partner) and Y-score (partner→LINC02398) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMTURN →+0.533+0.513<.001<.00133
LUADPDE3A →+0.548+1.786<.001.00133
OVRHBDF2_S385 →-0.742-1.259.002<.00133
LSCCMPRIP_S891 →+0.587+0.713.002<.00133
LSCCMAP1A_S1762 →+1.136+0.886.007.00433
HNSCLIMA1_S609 →-0.500-0.669<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,544 associations by consensus.

LINC02398 vs MTURN — GBM

Per-sample scatter of LINC02398 vs MTURN in GBM (Pearson r = 0.31).

Explore this scatter interactively →

Exploration