LINC02396

Across TCGA patient cohorts, LINC02396 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,561 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02396-associated GO terms across cancer lineages are Peptidyl-lysine modification, Transport along microtubule, and Microtubule nucleation. Each is linked with LINC02396 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC02396-to-partner and partner-to-LINC02396 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peptidyl-lysine modification grouped by LINC02396-low versus LINC02396-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02396→partner) and Y-score (partner→LINC02396) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Peptidyl-lysine modification →	+0.058	+0.064	<.001	<.001	3	15
STAD	Transport along microtubule →	+0.053	+0.069	<.001	<.001	3	14
STAD	Microtubule nucleation →	+0.063	+0.059	<.001	<.001	3	14
STAD	Mitochondrial membrane organization →	+0.062	+0.053	<.001	<.001	3	14
STAD	Cytoskeleton-dependent intracellular transport →	+0.051	+0.065	<.001	<.001	3	13
STAD	Organelle transport along microtubule →	+0.054	+0.058	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,561 associations by consensus.

Peptidyl-lysine modification by LINC02396 expression — STAD

Explore this box plot interactively →