LINC02393

Across TCGA patient cohorts, LINC02393 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,847 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC02393-associated GO terms across cancer lineages are Signal transduction by p53 class mediator, Regulation of signal transduction by p53 class mediator, and Regeneration. Each is linked with LINC02393 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC02393-to-partner and partner-to-LINC02393 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Signal transduction by p53 class mediator grouped by LINC02393-low versus LINC02393-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC02393→partner) and Y-score (partner→LINC02393) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Signal transduction by p53 class mediator →	+0.054	+0.100	<.001	<.001	3	11
STAD	Regulation of signal transduction by p53 class mediator →	+0.059	+0.099	<.001	<.001	3	11
ESCA	Regeneration →	+0.055	+0.229	<.001	.001	2	12
ESCA	Regulation of microtubule polymerization or depolymerization →	+0.067	+0.210	<.001	<.001	3	11
STAD	Negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage →	+0.060	+0.098	<.001	<.001	3	10
ESCA	Microtubule depolymerization →	+0.042	+0.172	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,847 associations by consensus.

Signal transduction by p53 class mediator by LINC02393 expression — STAD

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